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BACs
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- BAC neighbor queries -
Given a BAC (accession or clone name), which other BACs may overlap or be adjacent to that BAC?
BAC-BACend blast calculation
dates and parameters
Find BACs that may overlap BAC
with overlap length >=
(Minimum 1000)
with hit percent >=
BAC-BAC
Find BACs that have an end-sequence that hits BAC
BES_BAC
Find BACs possibly once-removed from BAC
via BAC ends from a common BAC
BAC1-BES-BES-BAC2
Find BACs possibly once-removed from BAC
via FOSMID from a common BAC
BAC1-FOS1-BES-FOS2
Get all three BAC neighbor reports
All the above conditions
Other specialized queries
Queries for relationships among BACs, markers, and contigs.
Includes all markers and marker aliases.
All report tables are downloadable.
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