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- news - |
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- December, 2008
* International Conference on Legume Genomics and Genetics, Puerto Vallarta, Mexico
- January, 2008
* 7x draft soybean genome sequence available
- November, 2007
*
Sixth European Conference on Grain Legumes: Integrating Legume Biology for Sustainable Agriculture, Lisbon, Portugal.
- April 20, 2007
* Release 1.0 of Medicago genome assembly available at medicago.org/genome/release1.0;
* CViT upgraded to provide one-click links.
- March 28, 2007
* Model Legume Congress, Tunis, Tunisia.
- September 1, 2006
*
NSF extends for funding for additional Medicago sequencing.
- August 1, 2006
* New BAC Passport feature available.
* Genome assembly browser upgraded to show more clones and sequencing status.
- July 16, 2006:
* assembly of Medicago genome completed.
- June 30, 2006:
U MN genetic map is now available.
- March 27, 2006: new genome build.
- January 18, 2006: new markers (in all reports and downloads ).
- January 9, 2006: new genome build.
- Novermber 1, 2005:
new markers (in all reports and downloads ).
- October 27, 2005:
* Genome build (above) and images ("Genome snapshots")
with additional ordering and orienting and assembly into supercontigs).
- September 15, 2005:
new markers (in all reports and downloads ).
- September 12, 2005i:
New genome build and images.
- August 19, 2005:
New genome build and images.
- August 12, 2005:
* Report
of June NSF-sponsored Workshop on Medicago Genomics and Informatics, Asilomar California.
- August 3, 2005:
* New tools online: CViT-blast,
visual blast tool; CViT-BACs,
shows BACS on the psuedochromsomes.
- July 8, 2005:
20 new markers (in all reports and
downloads ).
- June 8, 2005
* IMGAG download update;
Medicago peptide predictions and annotations now for 654 BACs.
- May 20, 2005
* New
IMGAG
BAC and gene viewer in
Ensembl.
- April 18, 2005
* New genome assembly (click chromosome images above for applet and tables).
* 30 new markers and recalculated cM positions (in all reports).
- March 21, 2005
* Gene predictions released by IMGAG (International
Medicago Genome Annotation Group)
- March 18, 2005:
* Gene predictions on 547 finished BAC sequences, from
IMGAG (International Medicago Genome Annotation Group).
- March 1, 2005:
* 65 new markers (in all reports and downloads).
* New reports of associations between FPC contigs.
- Febuary 25, 2005:
* New genome assembly (click chromosome images above for applet and tables).
* Improved links from all reports to data here and at other sites.
- Febuary 7, 2005:
* Update of BAC, marker, and contig anomalies, in all "search"
reports and here.
- January 25, 2005:
* New version of the BAC sequence contig viewer applet, index page
and here.
* Many new potential FPC "contig joins" via BAC overlap relationships at the
downloads page.
- January 11, 2005:
* Database update: 173 new SSR markers are added to database. Download all markers here.
- December 20, 2004:
* New blast capacity; targets updated weekly.
* New "overlap tables" layout, analysis.
* New contig-overlap analysis.
- December 10, 2004:
* Revision of medicago.org, genome Statistics, Overlap Tables pages
* Twice-weekly updates of all BAC sequences, for download.
* Updated genome-wide BAC overlap analysis.
* New Sequence contig viewer applet.
- November 2, 2004:
* Database update: 50 new markers, updated BAC-end x BAC comparison.
* New marker download and BAC end sequence files.
* Simplified web layout and batch marker/BAC/contig search (all pages).
* New data anomalies reporting added to site. (Requires username/password)
- September 20, 2004:
* Updated genome-wide BAC overlap analysis.
* Database update on this site, including 30 new SSR markers and anchored contigs.
* Placement of additional BACs in order by cM or BAC overlap(e.g. chr 2)
- July 28, 2004: updated BAC overlap analysis
BAC overlap analysis
- July 18-21, 2004:
* North American Alfalfa Improvement Conference (NAAIC)
and Trifolium Conference Quebec City, Canada
- July 9, 2004: New genome-wide BAC overlap analysis:
images and table, and new views at
"Ordered BACs"
- July 9, 2004:
Database update on this site,
-including all new markers and anchored contigs from
the UC Davis mtgenome database version 3.
The medicago.org and mtgenome databases are consistent and complementary, but not identical.
See a description of differences and features at both sites.
- June, 2004:
Lotus japonicus genome site
- June, 2004:
New markers and genotype data from the lab of Thierry Huguet
New spreadsheets showing all markers on each chromosome,
SSR markers
- June 7-11, 2004:
5th European Conference on grain legumes / ICLGG 2004
Dijon, France.
- June 6, 2004:
New spreadsheets showing all markers on each chromosome,
including markers extrapolated from other maps.
- June 6, 2004:
New version of the UC Davis mtgenome database
UC Davis mtgenome database
- May 1, 2004: New version of the database at this site,
with default UC Davis markers and names and hot-linked BACs, markers, and contigs.
See new "Ordered BACs" views at index.php
and marker aliases and BAC-sequence overlap table at BACmarker_queries.php.
- May 1, 2004: TIGR Medicago truncatula Database,
with BAC annotations, marker mapping, EST Gene Index, BAC ends
-
April 22, 2004: UC Davis MTGENOME Database is now open to the public mtgenome.ucdavis.edu/db/
-
April 16, 2004: New version of UC Davis marker, physical map site and database: mtgenome.ucdavis.edu
- March 5, 2004: Site reorganization, many new queries
-
March 1, 2004: Ensembl-based genome annotation viewer, DeCIFR
- Febuary 16, 2004: Steering Committee minutes from Jan. 2004, San Diego meeting.
- Febuary 1, 2004: new features for sequencing centers at the BAC registry
- January 20: new UC Davis physical map site
- January 8, 2004: updated marker and BAC spreadsheets.
- December 15, 2003: Citations and abstracts on the Medicago truncatula genome.
- December 12, 2003: 63,415 new TIGR BAC ends are at
ftp://ftp.tigr.org/pub/data/m_truncatula/.
- November 10-15, 2003:
Medicago meeting
in Toulouse, France.
- November, 2003: NSF-funded sequencing begins at TIGR and OU, extends strong OU work.
- Oct 24, 2003: This site is up. Spreadsheets show
marker, BAC, and contig associations.
- October, 2003: The project receives
NSF funding.
As a result of many peoples' efforts,
the project is starting with a strong foundation.
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